BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C02SP1|AL426173
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1664 1500 0.0
>3x_Contig1664
Length = 15696
Score = 1500 bits (748), Expect = 0.0
Identities = 772/788 (97%), Gaps = 1/788 (0%)
Strand = Plus / Plus
Query: 1 aggagagagattatcgaatgatgtcaattatcagccttttatcgtggaatgttgtggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4632 aggagagagattatcgaatgatgtcaattatcagccttttatcgtggaatgttgtggtaa 4691
Query: 61 ttcgttaaacgtaacttatatcatcgtttgctcccctcctgtaatcactagtgctttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4692 ttcgttaaacgtaacttatatcatcgtttgctcccctcctgtaatcactagtgctttcat 4751
Query: 121 taaaggctcgtcttgtgtctcatttattgatctctgcatttgctttgtttcctgttttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4752 taaaggctcgtcttgtgtctcatttattgatctctgcatttgctttgtttcctgttttat 4811
Query: 181 tccggtggttaaracataaaatcacctcgtaatattactattttggtgttatctttggtt 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4812 tccggtggttaaaacataaaatcacctcgtaatattactattttggtgttatctttggtt 4871
Query: 241 gtgtgactgtsactgcttctcttagacatacttccttattatgtttgcrccaagagtaat 300
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4872 gtgtgactgtcactgcttctcttagacatacttccttattatgtttgcaccaagagtaat 4931
Query: 301 ctcatacactcttaaragaacttcattatataatacaaatrtatttrgrcgcatatgcat 360
||||||||||||||| |||||||||||||||||||||||| ||||| | |||||||||||
Sbjct: 4932 ctcatacactcttaaaagaacttcattatataatacaaatatatttagacgcatatgcat 4991
Query: 361 attctcttctcgttatcatttacggattcaattcttcgctttcttggragtttctgcaga 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4992 attctcttctcgttatcatttacggattcaattcttcgctttcttggaagtttctgcaga 5051
Query: 421 ttcagaratgtcgtttgatttcctcttcttgaccatagaagtgagatcattgacaggggc 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5052 ttcagaaatgtcgtttgatttcctcttcttgaccatagaagtgagatcattgacaggggc 5111
Query: 481 ttcgttcgatttggccggcgcggragaggcctcggtaga-gaggctgttacggagtgaat 539
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 5112 ttcgttcgatttggccggcgcggaagaggcctcggtagaggaggctgttacggagtgaat 5171
Query: 540 cgtagacaatragtcgtttttcaaggattgcrtttgggcctcagattcttctagctcctt 599
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5172 cgtagacaataagtcgtttttcaaggattgcatttgggcctcagattcttctagctcctt 5231
Query: 600 tagtttggtttgtractcattcaatagatccttctggtcctcatcctctttatcgactgt 659
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5232 tagtttggtttgtaactcattcaatagatccttctggtcctcatcctctttatcgactgt 5291
Query: 660 kttacatctttgttttaataattcaatacatttctgtgaatttgacgtacattttttgaa 719
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5292 tttacatctttgttttaataattcaatacatttctgtaaatttgacgtacattttttgaa 5351
Query: 720 ttggtctggatcaaactcaagtgcaagtgagatcttataatatgattctataatagatct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5352 ttggtctggatcaaactcaagtgcaagtgagatcttataatatgattctataatagatct 5411
Query: 780 atcgattg 787
||||||||
Sbjct: 5412 atcgattg 5419
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5342
Number of Sequences: 1807
Number of extensions: 5342
Number of successful extensions: 107
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)